BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C09SP1|AL428194
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1921 0.0
>3x_Contig1388
Length = 8256
Score = 1921 bits (966), Expect = 0.0
Identities = 980/986 (99%), Gaps = 1/986 (0%)
Strand = Plus / Minus
Query: 8 tctgtataagccttctgtaatacacgaacatcattcaaaagtgtcgattccacaccctgt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6699 tctgtataagccttctgtaatacacgaacatcattcaaaagtgtcgattccacaccctgt 6640
Query: 68 ttacgttctctcctttctaaaaaggccttagtcttctcgttttcctcgctggcaacgttg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6639 ttacgttctctcctttctaaaaaggccttagtcttctcgttttcctcgctggcaacgttg 6580
Query: 128 atcttggcctgttcttggaataaagcaaattgttgacctttatttctgataatttcagbb 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6579 atcttggcctgttcttggaataaagcaaattgttgacctttatttctgataatttcagca 6520
Query: 188 vcggaaaaaaactttctcttggacaaaggtctcgtagcttcaatacgtactaaatcccct 247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6519 acggaaaaaaactttctcttggacaaaggtctcgtagcttcaatacgtactaaatcccct 6460
Query: 248 tcacgagaaacctcagattcatcatgaaccaaataatccttcctatggaacaactctttg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6459 tcacgagaaacctcagattcatcatgaaccaaataatccttcctatggaacaactctttg 6400
Query: 308 ttgattctcttatcgaaaactttggtctcaacacgaactttcacagtcttctgcatcttc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6399 ttgattctcttatcgaaaactttggtctcaacacgaactttcacagtcttctgcatcttc 6340
Query: 368 ccttgggagatgaccatcccaataaaattttgacgagccatggttsaaggtgggctaatt 427
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6339 ccttgggagatgaccatcccaataaaattttgacgagccatggttgaaggtgggctaatt 6280
Query: 428 tattcttggatagtggtatcgacgaaccaattgacacagagctaactagactgctctatt 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6279 tattcttggatagtggtatcgacgaaccaattgacacagagctaactagactgctctatt 6220
Query: 488 gttcttttaacagcatcgacctaaccgttcatggcctcaaggctttaaaattttttgatg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6219 gttcttttaacagcatcgacctaaccgttcatggcctcaaggctttaaaattttttgatg 6160
Query: 548 ttggaaagatcaccaccgtttctaatgatagatcacgtgatttagttcttcaccaagaat 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6159 ttggaaagatcaccaccgtttctaatgatagatcacgtgatttagttcttcaccaagaat 6100
Query: 608 atggaggtatgaggttagtcttgggttttatagaactaaactacttcttagcacacttgg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6099 atggaggtatgaggttagtcttgggttttatagaactaaactacttcttagcacacttgg 6040
Query: 668 cccagtttgaaacgtccgtgggtagattagaatgttataaggcaatgtgggacgctaaat 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6039 cccagtttgaaacgtccgtgggtagattagaatgttataaggcaatgtgggacgctaaat 5980
Query: 728 gtccctttttcatgttcctgttgctcttgagaatggcaaacggcttaacattctggccat 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5979 gtccctttttcatgttcctgttgctcttgagaatggcaaacggcttaacattctggccat 5920
Query: 788 aaaaattaaaggattggtctgttttagaatcttcacatgaccttaaatatcgaaactaac 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5919 aaaaattaaaggattggtctgttttagaatcttcacatgaccttaaatatcgaaactaac 5860
Query: 848 cgagagaaggggtttgaaggggtctacgataccagaaagaccaatcaaaacactgcgata 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5859 cgagagaaggggtttgaaggggtctacgataccagaaagaccaatcaaaacactgcgata 5800
Query: 908 tacatttaaattacagaggatttctatttcaaagatttttcaagg-aaactagccattaa 966
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5799 tacatttaaattacagaggatttctatttcaaagatttttcaaggaaaactagccattaa 5740
Query: 967 tcatggrttatcgaaatagtaaaagg 992
|||||| |||||||||||||||||||
Sbjct: 5739 tcatggattatcgaaatagtaaaagg 5714
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7596
Number of Sequences: 1807
Number of extensions: 7596
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)